Hi Knut - What are the permissions of this file? One thing you could try is to run bedpostx on /media/Elements/freesurfer/dti/1/dtsave/1/dmri directly from the command line instead of through trac-all and see if that works (monitor is a script that bedpostx launches that prints to the screen the number of slices that have been processed).
a.y
On Fri, 19 Aug 2011, Knut J Bjuland wrote:
Hi
I have started to run tracula on my own data. However when I run the second stage I get this erros bedpostx_seychelles: line 260: /media/Elements/freesurfer/dti/1/dtsave/1/dmri.bedpostX/monitor: Permission denied. I have tried running is as root as well but it did not help. Is there anything I can do to bypass thiss error. I am using Fedora 15.
Knut J
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