Marie,
Is this using the (somewhat new) Mac Intel distribution of freesurfer?
Or, I've put mri_glmfit for the Intel Mac here:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist
named mri_glmfit-macintel.gz
To install, copy it to your $FREESURFER_HOME/bin, then:
gunzip mri_glmfit-macintel.gz chmod a+x mri_glmfit-macintel cp mri_glmfit-macintel mri_glmfit
I think there was a byte-endian issue fixed in that binary.
Nick
On Tue, 2007-03-27 at 11:10 +0200, Marie Schaer wrote:
Hello everybody,
we have a problem with mri_glmfit on a mac pro (intel) with OS 10.4.8, all commands end up with bus error (see output below). It really seems to be a incompatible version of mri_glmfit (the same command work on a mac G5).
Do you have any version of mri_glmfit compiled for intel processors?
Thank you very much,
Marie Schaer
[marie-schaer-computer:freesurfer/subjects] marie% % mri_glmfit --y lh.test.10.mgh --fsgd fsgdf-test.txt --glmdir lh.test.glmdir --surf averagetest lh --C group.mat gdfReadHeader: reading fsgdf-monkeys-test.txt INFO: gd2mtx_method is dods Reading source surface /Applications/freesurfer/subjects/averagetest/ surf/lh.white Number of vertices 60170 Number of faces 120336 Total area 39702.574219 AvgVtxArea 0.659840 AvgVtxDist 0.894769 StdVtxDist 0.233584
$Id: mri_glmfit.c,v 1.78.2.7 2007/01/23 21:37:47 greve Exp $ cwd /Applications/freesurfer/subjects cmdline mri_glmfit --y lh.test.10.mgh --fsgd fsgdf-test.txt --glmdir lh.test.glmdir --surf averagetest lh --C group.mat sysname Darwin hostname marie-schaer-computer.local machine i386 user marie FixVertexAreaFlag = 1 OneSampleGroupMean 0 y /Applications/freesurfer/subjects/lh.test.10.mgh FSGD fsgdf-test.txt glmdir lh.test.glmdir Creating output directory lh.test.glmdir Bus error [marie-schaer-computer:freesurfer/subjects] marie% _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer