Re: [Freesurfer] Gray Matter Errors, Ignored Areas

see:

http://surfer.nmr.mgh.harvard.edu/fswiki/FtpFileExchange

On Fri, 8 Jan 2016, Julio Alberto González Torre wrote:

Where could I upload it?

2016-01-07 14:44 GMT+01:00 Bruce Fischl fischl@nmr.mgh.harvard.edu: Hi Julio

  it's hard to tell why this is happening, but if you upload the
  entire subject directory and give us the coordinates of the
  inaccuracy we will take a look

  cheers
  Bruce
  On Thu, 7 Jan 2016, Julio Alberto González Torre wrote:

        Hi everyone.

        I have a little trouble. First of all, I performed
        the recommended
        reconstruction. When I inspect the results, the
        boundaries of white matter
        are correct, but the Gray Matter is incorrectly
        understimated.

        As I show in the attached file, large parts of gray
        matter were ignored on
        the pial surface.

        It is extrange, because when I inspect the aseg
        file, the voxels of those
        areas are correct classified as cortex.

        I have been searching how to fix it, but I was
        unable to find how to do it
        on the troubleshooting tutorials. When this problem
        appears in white matter
        tissue, can be corrected with control points. What
        can I do when the same
        problem is in gray matter?

        Thanks.Imágenes integradas 1


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