Hi Estephan,
1. Can't you just save tiffs of each of the different views and put them together in photoshop?
2. You can write tcl scripts to do this kind of thing. For example
make_movie.tcl: read_binary_sulc set min_p 0 set max_p 36
for {set pno $min_p } { $pno <= $max_p} {incr pno 1} {
redraw set fname $hemi.angle${pno}[format "%04d" $pno].tif save_tiff $fname puts "finished saving tiff file $fname" rotate_brain_y 10 } exit
then run
tksurfer $subject $hemi inflated -tcl make_movie.tcl
cheers, Bruce
On Sun, 1 Nov 2009, Estephan Moana wrote:
Hello FreeSurfer experts,
I am playing with displaying FEAT output over the 3D pial surface provided by FS. I was wondering if somebody knows how to:
- See both hemispheres side-by-side at the same time (both pial and inflated, if possible);
- Make a video of the output 3D brain rotating at a certain axis (x,y or z), and maybe transitioning from pial to inflated surface. This may not really matters for scientific purposes, but it should produce some "wows" during lectures and thesis defense (my goal). AFNI does it, but its rendering option makes the image grainy, resulting in a video with poor resolution.
Thank you.
Estephan Moana, DDS Graduate Student Oral Biology PhD Program - Neurobiology track School of Dentistry, UNC- Chapel Hill 2140 Old Dental Building, CB# 7455 Chapel Hill, NC 27599 Phone: (919) 966-5680 Fax: (919) 966-5339 moana@email.unc.edu