On 7/7/2020 3:14 AM, Ellen Ji wrote:
External Email - Use Caution
Dear experts,
I am running bbregister and have a couple questions:
- I am using freesurfer version 7. My understanding is that I do not
need any --init argument anymore, and without it, by default it uses init-coreg. Could you confirm this? (I tested the below and it seemed fine)
bbregister --s subject1 --mov $dtipath/subject1/data.nii.gz --dti --reg mri/register.dat
Correct, you do not need --init
- A colleague performed recon-all using freesurfer v6. Is it ok if I
use bbregister on these subjects using freesurfer v7 or should I install v6?
No, you can use v7 bbregister with v6 subjects
Many thanks for your input!
Ellen Ji, PhD Postdoctoral researcher
Individual Differences in Psychosis (IDP) Lab Psychiatric University Hospital University of Zürich ellen.ji@bli.uzh.ch
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer