Re: [Freesurfer] Labels from Pial surface

when you run mri_annotation2label you can specify the surface (--surface). By default, it uses white, but you can specify pial instead

On 08/21/2017 11:33 AM, Fereshte wrote:

Hello FreeSurfer developers, Is it possible to have the segmentation labels after the pial surface is done in FreeSurfer? I mean once you do the topology correction and expand the inner cortical boundary to make the pial surface ; is it possible to have the inner and outer cortical boundaries as labels from pial surface? Looking forward to hearing from you Sincerely, Fereshte Ramezani

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