Dear Anastasia, May I ask you a question? I have run Tracula and found there was only one single curve for some tracts. But others went well. I tried setting reinit parameter to 1 and rerunning "trac-all -prior" and "trac-all -path" but didn't get improved, e.g., the right UNC was a single curve (see attached). I also checked the two end point set of right UNC (i.e.,endpt1.pd.nii.gz and endpt2.pd.nii.gz) (see attached) and found those end points were visually not correct when loaded to FA image. I guess maybe the reason of the single curve problem. Is there anyway to fix this problem? I'd appreciate it if could take a look at it for me. If you need more files for the diagnosis please let me know. Looking forward to hearing from you. Thank you very much.
Best, Xiaofu
On Wed, Apr 13, 2016 at 5:56 PM, Xiaofu xiaofuhe2008@gmail.com wrote:
Dear Anastasia, One quick question. I have run Tracula and found there was only one single curve for some tracts. But other tract went well I tried setting reinit parameter to 1 and rerunning "trac-all -prior" and "trac-all -path" but didn't get improved, e.g., the right UNC was a single curve (see attached). I also checked the initial seeds of right UNC (i.e.,endpt1.pd.nii.gz and endpt2.pd.nii.gz) and found those seeds were visually not correct when loaded to FA image. I guess maybe the reason of the single curve problem. Is there anyway to fix this problem? Looking forward to hearing from you. Thank you very much.
Best, Xiaofu
