Hello FreeSurfer Developers,
I’m having issues with the hippocampal subfields segmentation using OS X Yosemite v10.10.5, Freesurfer dev version 6.0, Freesurfer Subject Stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 Current Stamp: freesurfer-Linux-centos6_x86_64-dev-20160616-8264611.
I ran the recon-all -s VE002 -hippocampal-subfields-T1 command and keep getting an error message : Error:CTF file '/usr/local/freesurfer-dev/bin/segmentSubjectT1_autoEstimateAlveusML.ctf' failed to open for 'Read' access. Error message: 'Open a zip file for read/modify failed.’
The segmented hippocampal files as described on free surfer wiki cannot be found under the subject ‘mri’ folder. I understand other users have complained of a similar issue within the last week.
I’d ve grateful if you could assist me with the issue above.
Many thanks Permesh
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