Re: [Freesurfer] How to run GLM FIT simulation in parallel?

I don't know what Slurm is, so I guess the answer is no. If you have multiple processors on your machine, you can use the --bg option. In general, I have not seen it take that long to run. How many input subjects do you have?

On 12/06/2018 12:55 PM, Sahil Bajaj wrote:

External Email - Use Caution

Hello experts,

I was trying to run mri_glmfit-sim --glmdir XY.glmdir --perm 1000 1.3 abs --cwp 0.05 --2spaces command, but its taking forever even if I reduce # of permutations from 1000 to 10.

I was just wondering if there’s a version of FreeSurfer for Slurm parallel processing clusters.

Thanks ! Sahil

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer