Re: [Freesurfer] Problem with topology fixing

Hi Bruce,

The log file tells that mris_fix_topology did fail (euler number != 2) and that's why the topo_fixer was used.

Ed

On 1 Sep 2009, at 15:12, Bruce Fischl wrote:

did you try using the old (default) topology fixer? Usually mris_fix_topology is called in recon-all unless you specify otherwise.

cheers, Bruce On Tue, 1 Sep 2009, Ed Gronenschild wrote:

...

Hi,

I got the following error during processing my subject nr 104 with recon-all:

ERROR: - FindPacePath: could not find path.

The error log tells that it occurred during execution of the command

mris_topo_fixer -mgz -warnings 104 rh

What to do?

Ed

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