Re: [Freesurfer] make_average_subject error?

-- Brian C. Schweinsburg, Ph.D. Assistant Adjunct Professor of Psychiatry University of California, San Diego Office: 858-552-8585 x6109 Cell: 858-354-3756 From: Doug Greve greve@nmr.mgh.harvard.edu Date: Tue, 27 Sep 2005 11:16:00 -0400 To: "Brian Schweinsburg, Ph.D." bschweinsburg@ucsd.edu Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] make_average_subject error? Can you run make_average_surface and make_average_volume separately? Brian Schweinsburg, Ph.D. wrote: > > I ran it with make_average_subject --debug \ > --subjects SC010 SC012 ... > > I also tried it with --echo. It provides no output. > > I checked the script and it is executable. I looked through the code and > everything seems reasonable given my system except the part that says: > "if person = brian; exit 0" > > Brian > > > >> >> From: Doug Greve greve@nmr.mgh.harvard.edu >> mailto:greve@nmr.mgh.harvard.edu >> Date: Mon, 26 Sep 2005 16:40:48 -0400 >> To: "Brian Schweinsburg, Ph.D." bschweinsburg@ucsd.edu >> mailto:bschweinsburg@ucsd.edu >> Cc: "freesurfer@nmr.mgh.harvard.edu" mailto:freesurfer@nmr.mgh.harvard.edu >> freesurfer@nmr.mgh.harvard.edu mailto:freesurfer@nmr.mgh.harvard.edu >> Subject: Re: [Freesurfer] make_average_subject error? >> >> >> try running it with --debug and send us the output >> >> Brian Schweinsburg, Ph.D. wrote: >> >> >> >>> >>> Hi Folks, >>> >>> I tried running the latest make_average_subject script (and the >>> make_average_surface/volume scripts) using the expected command line syntax >>> and after hitting enter it immediately exits to the csh without error, but >>> does not produce anything. >>> >>> make_average_subject --subjects SC010 SC011 SC012 ... >>> >>> I am running the latested dev release with Fedora Core 4. >>> >>> Any ideas as to the problem? >>> Brian >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> >>> >>> >> >> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> greve@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> >> > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422