Hi Laurena
it doesn't use tensor fitting at all.
cheers Bruce On Mon, 4 Apr 2016, Holleran, Laurena wrote:
Thanks Bruce,
I have not used TRACULA before but I'll look into it. Does the tensor estimation have to be carried out using dtirecon for TRACULA or can I input tensor calculations from another software?
Thanks
Laurena ________________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Bruce Fischl fischl@nmr.mgh.harvard.edu Sent: 04 April 2016 15:45 To: Freesurfer support list Subject: Re: [Freesurfer] white matter parcellation
Hi Laurena
yes, this is what TRACULA does. Usually it requires diffusion data, but you might be able to run it without (which would amount to mapping the tracts from the atlas onto your individual subject). Perhaps Anastasia can comment?
cheers Bruce
On Mon, 4 Apr 2016, Holleran, Laurena wrote:
Hello experts,
I wanted to know if there are any other white matter parcellation methods being developed which specifically label white matter tracts? I know that the wmparc voxel are assigned a label based on the piece of cortex that is closest too it​, however a significant portion of the white matter remains unclassified or "unknown". If there are no plans to develop an atlas of this sort you can just let me know.
Many thanks.
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