Re: [Freesurfer] Error with mris_anatomical_stats in v6 and high-res data

Hi Ed

was there any error message or anything? It just seems to end normally but then gives a nonzero exit code causing recon-all to stop?

cheers Bruce On Mon, 13 Feb 2017, Gronenschild Ed (NP) wrote:

Hi,

All datasets that I've processed sofar with v6 resulted in exactly the same error during running the command:

mris_anatomical_stats -th3 -mgz -f ../stats/rh.BA_exvivo.thresh.stats -b -a ./rh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab 001 rh white

I'm on a MacPro OSX10.7 with 32 GB RAM. These are 7T high-res data (0.7 mm isotropic voxel size) and were previously processed successfully with v6b. The log file is attached.

Cheers, Ed