Dear all,
I am trying to make work Qdec on my system ubuntu 12.04.
freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0
After I have loaded my qdec.table.dat and renamed the analysis folder , when I then try to create the "stats tables", I get an error and it blocks at 20% of the waiting bar.
Data table loading completed successfully.
SUBJECTS_DIR is '~/Documents/ARNAUD/'
mkdir -p /usr/local/freesurfer/subjects/qdec/stats_tables/
mkdir: cannot create directory `/usr/local/freesurfer/subjects/qdec':
Permission denied
ERROR: In
/usr/pubsw/packages/KWWidgets/CVS-vtk560/KWWidgets/vtkKWTkUtilities.cxx, line 230
vtkKWQdecApp (0x289a94e0):
Script:vtkTemp2 GenerateStatsDataTables
Returned Error on line 1:Uncaught exception: command failed: mkdir -p
/usr/local/freesurfer/subjects/qdec/stats_tables/
Stack trace:
Uncaught exception: command failed: mkdir -p
/usr/local/freesurfer/subjects/qdec/stats_tables/
while executing"vtkTemp2 GenerateStatsDataTables"
It seems that it tries to write into the default SUBJECT_DIR, thing that I
do not understand as I put the actual SUBJECT_DIR in the top line of qdec.table.dat (and it is correctly recognized in the qdec window SUBJECTS_DIR).
How could I come around that problem?
Thanks in advance! Markus