You need to load it as an overlay onto a surface. If you mapped your FC onto the native subject space, then use the subject's surface. If you used fsaverage, then use the fsaverage surface. doug
On 09/03/2014 11:58 AM, Martin Scherr wrote:
Dear Freesurfer experts,
We are trying to perform a resting state functional connectivity analysis (seed based, seed = PCC) in a single patient. How can we visualize the map of the (expected) DMN of this single patient in freeview? We tried an overlay with
<subjectname>/mri/orig.mgz and <session>/bold/fc.lpccseed.surf.lh/pr001/L_Posteriorcingulate/sig.nii.gz
which didn't work.
Please help!
Best,
Martin
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