Hi Resa
you can create a label of the region you are interested in and use the mask_label command on the tcl prompt when running tksurfer.
cheers Bruce
On Thu, 13 Jun 2013, Reza Rajimehr wrote:
Hi,
Using anatomical parcellation, I have labels for the occipital and temporal lobes in my subject. I have a functional map in the same subject that I want to show the activity only in the occipital and temporal cortex, and I want to mask the activity in the other parts of the cortical surface. How can I do this with FS-FAST/Freesurfer?
Thanks, Reza
Reza Rajimehr, MD Postdoctoral Research Fellow
McGovern Institute for Brain Research Massachusetts Institute of Technology (MIT)
NMR Martinos Center Massachusetts General Hospital (MGH) Harvard University
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer