Thanks Doug, but for instance in my result the inferiorparietal region is significantly different in some areas but not in the entire region, so in this case it will difficult because i have to move the cursor to regions where it is significant and other vertex where it is not significant this means that i will have two or more coordinates to report a single region, i am wondering is there a way to identify in this map which cluster is significant and report its center coordinate.
Thanks in advance
venkat
________________________________
From: Douglas N Greve [mailto:greve@nmr.mgh.harvard.edu] Sent: Thu 5/20/2010 1:33 PM To: Rajagopalan, Venkateswaran Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Reporting coordinates from Group analysis
If you click on a point, it should tell you in the control window what the talairach coordinates are
doug
Rajagopalan, Venkateswaran wrote:
Dear All,
I checked the archives but couldn't get a complete answer. I performed group analysis of cortical thickness using mri_glmfit. I am wondering how to report the coordinates of regions where cortical thickness is significantly different, i used FDR for multiple comparisons in tksurfer. So how to get these coordinates after FDR where is this file stored.
Thanks
venkat
===================================
P Please consider the environment before printing this e-mail
Cleveland Clinic is ranked one of the top hospitals in America by U.S.News & World Report (2009). Visit us online at http://www.clevelandclinic.org http://www.clevelandclinic.org/ for a complete listing of our services, staff and locations.
Confidentiality Note: This message is intended for use only by the individual or entity to which it is addressed and may contain information that is privileged, confidential, and exempt from disclosure under applicable law. If the reader of this message is not the intended recipient or the employee or agent responsible for delivering the message to the intended recipient, you are hereby notified that any dissemination, distribution or copying of this communication is strictly prohibited. If you have received this communication in error, please contact the sender immediately and destroy the material in its entirety, whether electronic or hard copy. Thank you.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
===================================
P Please consider the environment before printing this e-mail
Cleveland Clinic is ranked one of the top hospitals in America by U.S.News & World Report (2009). Visit us online at http://www.clevelandclinic.org for a complete listing of our services, staff and locations.
Confidentiality Note: This message is intended for use only by the individual or entity to which it is addressed and may contain information that is privileged, confidential, and exempt from disclosure under applicable law. If the reader of this message is not the intended recipient or the employee or agent responsible for delivering the message to the intended recipient, you are hereby notified that any dissemination, distribution or copying of this communication is strictly prohibited. If you have received this communication in error, please contact the sender immediately and destroy the material in its entirety, whether electronic or hard copy. Thank you.