14 Aug
2019
14 Aug
'19
1:15 p.m.
External Email - Use Caution
the surface based pet analysis in the petsurfer link use the whole brain. i want to do my surface base pet analysis on specific regions of the aparc not the entire regions. Should i use mri_vol2label to extract the covert the volume to labels, them mri_mergelabels to merge them? Thanks.
On Wed, Aug 14, 2019 at 1:08 PM Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> wrote:
Then just do the standard PETsurfer processing
On 8/14/19 12:59 PM, miracle ozzoude wrote:
External Email - Use CautionI want to use the aparc ROI. something similar to doing ROI surface base cortical thickness analysis where i used mri_annotation2label to extract the regions and mri_mergelabels to merge them and run analysis on them.
On Wed, Aug 14, 2019 at 11:59 AM Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu mailto:DGREVE@mgh.harvard.edu> wrote:
Do you mean using different ROIs than in the aparc? If you want to use the aparc, then that is done in the standard processing. On 8/14/19 11:16 AM, miracle ozzoude wrote: > > External Email - Use Caution > > Hey Doug, > > If i want to do ROI surface base PET analysis using the method on the > PETsurfer website. Please, how do i go about doing it? I know there > series of commands i will need to run before project it to the surface > using mri_vol2surf. > thanks a lot > best, > Paul > > On Tue, Aug 13, 2019 at 11:00 AM miracle ozzoude <miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com>>>wrote:
> > Awesome. thanks a lot for your help. I appreciate it. > > Best, > Paul > > On Tue, Aug 13, 2019 at 10:59 AM Greve, Douglas N.,Ph.D. > <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> wrote: > > You can use mri_surfcluster. That actually has an --fdr flag, > so you > should not need to run mri_fdr. When you use --fdr, you do not > use > --thmin. Use --sum to get the summary file > > On 8/13/19 10:50 AM, miracle ozzoude wrote: > > > > External Email - Use Caution > > > > Thanks a lot doug. I want to use mri_fdr instead of > mri_glmfit-sim. > > How do i get a summary of clusters like mri_glmfit-sim? I > searched > > through the forum and based on previous responses, The > advice was to > > do mri_fdr and then use mri_surfcluster without the fdr > option to > > obtain the summary of cluster. Is this correct? > > Paul > > > > On Tue, Aug 13, 2019 at 10:39 AM Greve, Douglas N.,Ph.D. > > <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>> wrote: > > > > I don't know that there is much you can do. The PVR is very > > computationally intensive, and it does not surpriseme
> that it is > > taking > > a long time. I don't think you need to do 10k > permutations. I would > > start with 1k. In the output, you will get a confidence > interval > > for the > > corrected p-value. This will shrink with the numberof
> > permutations, but > > if you're happy with it, no need to do more > > > > On 8/13/19 10:17 AM, miracle ozzoude wrote: > > > > > > External Email - Use Caution > > > > > > Thanks Doug. My correction for multiple comparison > using 10000 > > > permutation and abs has been running for 3days.This
> is strange > > > because i am using the --bg 10 and it usually takes > 1hr to finish > > > without the --pvr. how do i solve this? > > > Below is my mri_glmfit and mri_glmfit-sim commands > > > > > > mri_glmfit --y ${lhpetsurfimg} --fsgd $bothgrpfsgd > dods --C $pvr1 > > > --pvr ${wholebrain}/lh.$grp1fsgd.pvr.thickness.mgh\
> > > --pvr ${wholebrain}/lh.$grp2fsgd.pvr.thickness.mgh --surf > > fsaverage lh > > > --cortex \ > > > --glmdir ${wholebrain}/lh.pet.thickness.glmdir --eres-save > > > > > > mri_glmfit-sim --glmdir > ${wholebrain}/lh.pet.thickness.glmdir > > --perm > > > 10000 2 abs --perm-force --cwp 0.05 --2spaces --bg 10 > --overwrite > > > > > > > > > On Mon, Aug 12, 2019 at 11:31 AM Greve, Douglas N.,Ph.D. > > > <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>> > > wrote: > > > > > > You will have to click on the vertex you are > interested in. The > > > value will be -log10(pcorrected) where pcorrected > is the > > corrected > > > p-value > > > > > > On 8/12/2019 11:24 AM, miracle ozzoude wrote: > > >> > > >> External Email - Use Caution > > >> > > >> these regions (please see below) came out > significant for the > > >> voxel-wise corrected map. I want to know their > p-values. > > >> mri-glmfit-sim doesn't give summary file for > voxel-wise > > corrected > > >> map only for cluster-wise map. > > >> image.png > > >> > > >> On Mon, Aug 12, 2019 at 11:19 AM Greve,Douglas
> N.,Ph.D. > > >> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>> > > wrote: > > >> > > >> I'm not sure what you are looking for. The > voxel-wise > > >> analysis is voxel-wise, so there is no > summary file for it > > >> > > >> On 8/12/2019 11:13 AM, miracle ozzoude wrote: > > >>> > > >>> External Email - Use Caution > > >>> > > >>> Thanks Doug. Another question, how do i find > the p-values > > >>> for voxel-wise map corrected for multiple > comparisons at a > > >>> voxel (rather than cluster) level > > >>> (perm.th40.abs.sig.voxel.mgh). There is no summary > > file for it. > > >>> Best, > > >>> Paul > > >>> > > >>> On Wed, Aug 7, 2019 at 11:08 AM Greve, > Douglas N.,Ph.D. > > >>> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>> wrote: > > >>> > > >>> The 3 spaces is for left hemi, right > hemi, and > > >>> subcortical, so, if you > > >>> are using all three then correct for all 3 > > >>> > > >>> On 8/7/19 9:26 AM, miracle ozzoude wrote: > > >>> > > > >>> > External Email - UseCaution
> > >>> > > > >>> > Got it. Thanks a lot doug. If ihave
> to correct for > > >>> multiple > > >>> > comparison in surface based pet > analysis and > > >>> mutlimodal analysis (pet > > >>> > and thickness), should i use --3spaces? > > >>> > Thank you. > > >>> > > > >>> > best, > > >>> > Paul > > >>> > > > >>> > On Mon, Aug 5, 2019 at 10:19 PM Greve, > Douglas > > N.,Ph.D. > > >>> > <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>>> wrote: > > >>> > > > >>> > I think there is stillsomething
> not right. You > > >>> should just have > > >>> > one mri_glmfit command for each > hemisphere in > > >>> which the input is > > >>> > ?h.thickness.15.mgh, the fsgdfile is > > project.fsgd, > > >>> you then > > >>> > specify the pvrs for both groups > (--pvr > > >>> ?h.pvr_grp1_pet.nii.gz > > >>> > --pvr ?h.pvr_grp2_pet.niigz)and
> then use that > > >>> first contrast. The > > >>> > second is the same as the first > but with a > > >>> reversed sign, but it > > >>> > is not necessary since wealways
> use unsigned > > >>> tests and show both > > >>> > signs (but you can still doit).
> > >>> > > > >>> > On 8/5/2019 8:14 PM, miracle > ozzoude wrote: > > >>> >> > > >>> >> External Email - Use Caution > > >>> >> > > >>> >> I think i got it now.Something
> like this: > > >>> >> > > >>> >> ## group1 comes first in my fsgd > file. removing > > >>> the effects of > > >>> >> age and education > > >>> >> ##amyloid-thickness. first pet pvr = > 1 for > > group1 > > >>> and 0 for group 2. > > >>> >> mri_glmfit --y > lh.thickness.15.mgh --fsgd > > >>> project.fsgd dods --c > > >>> >> pvr1.mtx --pvr > lh.pvr_grp1_pet.nii.gz \ > > >>> >> --pvr > > >>> allgrp2.lhmgxctx.fsaverage.sm05.zero.nii.gz -surf > > >>> >> fsaverage lh --cortex --glmdir > > >>> lh.pet.thickness.glmdir > > >>> >> mri_glmfit --y > rh.thickness.15.mgh --fsgd > > >>> project.fsgd dods --c > > >>> >> pvr1.mtx --pvr > rh.pvr_grp1_pet.nii.gz \ > > >>> >> --pvr > > >>>allgrp2.rhmgxctx.fsaverage.sm05.zero.nii.gz -surf
> fsaverage > > >>> >> lh --cortex --glmdir > rh.pet.thickness.glmdir > > >>> >> > > >>> >> contrast = 0 0 0 0 0 0 1 -1 > > >>> >> > > >>> >> ##group 2 is second in my fsgd file. > > removing the > > >>> effects of age > > >>> >> and education > > >>> >> ##amyloid-thickness. first pet pvr = > 0 for > > group1 > > >>> and 1 for group2 > > >>> >> mri_glmfit --y > lh.thickness.15.mgh --fsgd > > >>> project.fsgd dods --c > > >>> >> pvr2.mtx --pvr > > >>> allgrp1.lhmgxctx.fsaverage.sm05.zero.nii.gz \ > > >>> >> --pvr lh.pvr_grp2_pet.nii.gz > -surf fsaverage lh > > >>> --cortex --glmdir > > >>> >> rh.pet.thickness.glmdir > > >>> >> mri_glmfit --y > rh.thickness.15.mgh --fsgd > > >>> project.fsgd dods --c > > >>> >> pvr2.mtx --pvr > > >>> allgrp1.rhmgxctx.fsaverage.sm05.zero.nii.gz \ > > >>> >> --pvr rh.pvr_grp2_pet.nii.gz > -surf fsaverage lh > > >>> --cortex --glmdir > > >>> >> rh.pet.thickness.glmdir > > >>> >> > > >>> >> contrast = 0 0 0 0 0 0 -1 1 > > >>> >> > > >>> >> On Mon, Aug 5, 2019 at 6:47 PM > Greve, Douglas > > >>> N.,Ph.D. > > >>> >> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>>> wrote: > > >>> >> > > >>> >> It still looks like you are > using a group > > >>> specific input > > >>> >> (--y). The input should be a > simple > > file with > > >>> both groups > > >>> >> (same input as you would use > without pvr) > > >>> >> > > >>> >> On 8/5/2019 4:39 PM, > miracooloz wrote: > > >>> >>> > > >>> >>> External Email - Use Caution > > >>> >>> > > >>> >>> Thanks Doug. How about the mri_glmfit > > >>> commands? Since the > > >>> >>> contrasts are correct, I think the > > commands > > >>> should be right. > > >>> >>> > > >>> >>> Best, > > >>> >>> Paul. > > >>> >>> > > >>> >>> > > >>> >>> > > >>> >>> Sent from my Samsung Galaxy smartphone. > > >>> >>> > > >>> >>> -------- Original message -------- > > >>> >>> From: "Greve, Douglas N.,Ph.D." > > >>> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>> > > >>> >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>> > > >>> >>> Date: 2019-08-05 15:52 (GMT-05:00) > > >>> >>> To: > freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>>> > > >>> >>> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>> Subject: Re: [Freesurfer] Fwd: > multimodal > > >>> analysis (pet and > > >>> >>> cortical thickness relationship) using > > --pvr > > >>> >>> > > >>> >>> Yes, that contrast is correct. > > >>> >>> > > >>> >>> On 8/5/2019 3:11 PM, miracle > ozzoude > > wrote: > > >>> >>>> > > >>> >>>> External Email - Use Caution > > >>> >>>> > > >>> >>>> Hello Doug, > > >>> >>>> > > >>> >>>> Thanks very much for your help. Your > > >>> assumption was right > > >>> >>>> in that i want to run a group > comparison > > >>> (i.e. test for a > > >>> >>>> difference in amyloid-thickness slopes > > >>> between the two > > >>> >>>> groups). However, I am having a > hard time > > >>> creating the > > >>> >>>> correct mri_glmfit and contrasts > in this > > >>> case. Based on > > >>> >>>> your advice and searching through the > > forum > > >>> >>>> > > >>> > > > (https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2019-January/060029.ht... ), i
> > >>> >>>> need 2 PVRs for each hemisphere in the > > >>> mri_glmfit command. > > >>> >>>> I gave it another shot below. Please > > let me > > >>> know if i am > > >>> >>>> correct. > > >>> >>>> > > >>> >>>> Thank you. > > >>> >>>> Paul. > > >>> >>>> > > >>> >>>> ## group1 comes first in my fsgd file. > > >>> removing the effects > > >>> >>>> of age and education > > >>> >>>> ##amyloid-thickness. first pet pvr > = 1 for > > >>> group1 and 0 for > > >>> >>>> group 2. > > >>> >>>> mri_glmfit --y > > lh_pvr_grp1_thickness.mgh --fsgd > > >>> >>>> project.fsgd dods --c pvr1.mtx --pvr > > >>> lh.pvr_grp1_pet.nii.gz \ > > >>> >>>> --pvr > > >>> allgrp2.lhmgxctx.fsaverage.sm05.zero.nii.gz -surf > > >>> >>>> fsaverage lh --cortex --glmdir > > >>> lh.pet.thickness.glmdir > > >>> >>>> mri_glmfit --y > > rh_pvr_grp1_thickness.mgh --fsgd > > >>> >>>> project.fsgd dods --c pvr1.mtx --pvr > > >>> rh.pvr_grp1_pet.nii.gz \ > > >>> >>>> --pvr > > >>>allgrp2.rhmgxctx.fsaverage.sm05.zero.nii.gz -surf
> > >>> >>>> fsaverage lh --cortex --glmdir > > >>> rh.pet.thickness.glmdir > > >>> >>>> > > >>> >>>> contrast = 0 0 0 0 0 0 1 -1 > > >>> >>>> > > >>> >>>> ##group 2 is second in my fsgd file. > > >>> removing the effects > > >>> >>>> of age and education > > >>> >>>> ##amyloid-thickness. first pet pvr > = 0 for > > >>> group1 and 1 for > > >>> >>>> group2 > > >>> >>>> mri_glmfit --y > > >>> lh_pvr_grp2_thickness.mgh --fsgd > > >>> >>>> project.fsgd dods --c pvr2.mtx --pvr > > >>> >>>> > allgrp1.lhmgxctx.fsaverage.sm05.zero.nii.gz \ > > >>> >>>> --pvr lh.pvr_grp2_pet.nii.gz -surf > > >>> fsaverage lh --cortex > > >>> >>>> --glmdir rh.pet.thickness.glmdir > > >>> >>>> mri_glmfit --y > > rh_pvr_grp2_thickness.mgh --fsgd > > >>> >>>> project.fsgd dods --c pvr2.mtx --pvr > > >>> >>>> > allgrp1.rhmgxctx.fsaverage.sm05.zero.nii.gz \ > > >>> >>>> --pvr rh.pvr_grp2_pet.nii.gz -surf > > >>> fsaverage lh --cortex > > >>> >>>> --glmdir rh.pet.thickness.glmdir > > >>> >>>> > > >>> >>>> contrast = 0 0 0 0 0 0 -1 1 > > >>> >>>> > > >>> >>>> > > >>> >>>> On Mon, Aug 5, 2019 at 12:26 PM Greve, > > >>> Douglas N.,Ph.D. > > >>> >>>> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>>> wrote: > > >>> >>>> > > >>> >>>> That mostly looks good. > > >>> >>>> > > >>> >>>> I would suggest is to change your > > >>> smoothing command to > > >>> >>>> something like > > >>> >>>> mris_fwhm --smooth-only --s fsaverage > > >>> --hemi lh --fwhm > > >>> >>>> 5 --cortex --prune --i > > >>> >>>> > allgrp1.rlhmgxctx.fsaverage.sm00.nii.gz > > >>> >>>> allgrp1.lhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>> The only difference will be > that any > > >>> vertices that are > > >>> >>>> 0 in the input will be excluded > > >>> (pruned) from the > > >>> >>>> smoothing mask. > > >>> >>>> > > >>> >>>> The mri_glmfit command is not > right. > > >>> That command looks > > >>> >>>> like it is for analyzing each > group > > >>> separately and > > >>> >>>> independently. If that is what you > want > > >>> to do, then you > > >>> >>>> don't need to go through all the > > extra > > >>> stuff of > > >>> >>>> creating zero files, etc. I had > > assumed > > >>> that you wanted > > >>> >>>> to do some kind of comparison > between > > >>> groups. If so, > > >>> >>>> then you would use a single > file with > > >>> all your data in > > >>> >>>> it (probably what you were using > > >>> before), and your fsgd > > >>> >>>> file would have both groups. > > >>> >>>> > > >>> >>>> 1) will my fsgd file contain both > > groups? > > >>> >>>> yes, see above > > >>> >>>> 2) If the answer from question is > > yes, > > >>> i should have 2 > > >>> >>>> contrasts (pvr1.mtx for group1 and > > >>> pvr2.mtx for > > >>> >>>> group2). yes/no? > > >>> >>>> Again, if all you want to do is > > to test > > >>> the pvr for > > >>> >>>> each group separately, then > you don't > > >>> need to go > > >>> >>>> through the processes of creating > > zero > > >>> files, etc. In > > >>> >>>> any event, if you want to test > a pvr, > > >>> then you need a > > >>> >>>> contrast for it. > > >>> >>>> 3) below is a sample of my > fsgd file. > > >>> are the > > >>> >>>> constrasts correct? > > >>> >>>> hard to say without resolving the > > >>> questions above. You > > >>> >>>> will need to have a value in the > > >>> contrast for each pvr. > > >>> >>>> > > >>> >>>> > > >>> >>>> > > >>> >>>> On 8/2/2019 3:56 PM, miracle > > ozzoude wrote: > > >>> >>>>> > > >>> >>>>> External Email - Use Caution > > >>> >>>>> > > >>> >>>>> Hello Doug, > > >>> >>>>> > > >>> >>>>> Thanks for answering. Based on your > > >>> explanation, i > > >>> >>>>> wrote out a series of command needed > > >>> to execute this. > > >>> >>>>> Please let me know if i made any > > >>> mistakes/correct. > > >>> >>>>> ##step1 concatenating the 10 amyloid > > >>> pet volumes files > > >>> >>>>> projected to surface using > > >>> mri_vol2surf for group1 > > >>> >>>>> mri_concat --f grp1.lhmgxctx --o > > >>> >>>>> > allgrp1.lhmgxctx.fsaverage.sm00.nii.gz --prune > > >>> >>>>> mri_concat --f grp2.rhmgxctx --o > > >>> >>>>> > allgrp1.rhmgxctx.fsaverage.sm00.nii.gz --prune > > >>> >>>>> > > >>> >>>>> ##step2 concatenating the 20 amyloid > > >>> pet volumes files > > >>> >>>>> projected to surface using > > >>> mri_vol2surf for group2 > > >>> >>>>> mri_concat --f grp2.lhmgxctx --o > > >>> >>>>> > allgrp2.lhmgxctx.fsaverage.sm00.nii.gz --prune > > >>> >>>>> mri_concat --f grp2.rhmgxctx --o > > >>> >>>>> > allgrp2.rhmgxctx.fsaverage.sm00.nii.gz --prune > > >>> >>>>> > > >>> >>>>> ##step3 smooth on the surface for > each > > >>> hemisphere for > > >>> >>>>> group1 > > >>> >>>>> mri_surf2surf --hemi lh --s fsaverage > > >>> --sval > > >>> >>>>> > allgrp1.lhmgxctx.fsaverage.sm00.nii.gz --fwhm 5 > > >>> >>>>> --cortex --tval > > >>> allgrp1.lhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> mri_surf2surf --hemi rh --s fsaverage > > >>> --sval > > >>> >>>>> > allgrp1.rlhmgxctx.fsaverage.sm00.nii.gz > > --fwhm 5 > > >>> >>>>> --cortex --tval > > >>> allgrp1.rhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> > > >>> >>>>> ##step4 smooth on the surface for > each > > >>> hemisphere for > > >>> >>>>> group2 > > >>> >>>>> mri_surf2surf --hemi lh --s fsaverage > > >>> --sval > > >>> >>>>> > allgrp2.lhmgxctx.fsaverage.sm00.nii.gz --fwhm 5 > > >>> >>>>> --cortex --tval > > >>> allgrp2.lhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> mri_surf2surf --hemi rh --s fsaverage > > >>> --sval > > >>> >>>>> > allgrp2.rlhmgxctx.fsaverage.sm00.nii.gz > > --fwhm 5 > > >>> >>>>> --cortex --tval > > >>> allgrp2.rhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> > > >>> >>>>> ##step5 create files of zeros for > > >>> group1 for each > > >>> >>>>> hemisphere > > >>> >>>>> fscalc > > >>> allgrp1.lhmgxctx.fsaverage.sm05.nii.gz mul 0 -o > > >>> >>>>> > allgrp1.lhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> fscalc > > >>> allgrp1.rhmgxctx.fsaverage.sm05.nii.gz mul 0 -o > > >>> >>>>> > allgrp1.rhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> > > >>> >>>>> ##step6 create files of zeros for > > >>> group2 for each > > >>> >>>>> hemisphere > > >>> >>>>> fscalc > > >>> allgrp2.lhmgxctx.fsaverage.sm05.nii.gz mul 0 -o > > >>> >>>>> > allgrp2.lhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> fscalc > > >>> allgrp2.rhmgxctx.fsaverage.sm05.nii.gz mul 0 -o > > >>> >>>>> > allgrp2.rhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> > > >>> >>>>> ##step7 create pvr files for group1 > > >>> for each hemisphere > > >>> >>>>> mri_concat > > >>> allgrp1.lhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> > allgrp2.lhmgxctx.fsaverage.sm05.zero.nii.gz --o > > >>> >>>>> lh.pvr_grp1_pet.nii.gz > > >>> >>>>> mri_concat > > >>> allgrp1.rhmgxctx.fsaverage.sm05.nii.gz > > >>> >>>>> > allgrp2.rhmgxctx.fsaverage.sm05.zero.nii.gz --o > > >>> >>>>> rh.pvr_grp1_pet.nii.gz > > >>> >>>>> > > >>> >>>>> ##step8 create pvr files for group2 > > >>> for each hemisphere > > >>> >>>>> mri_concat > > >>> allgrp1.lhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> > allgrp2.lhmgxctx.fsaverage.sm05.nii.gz --o > > >>> >>>>> lh.pvr_grp2_pet.nii.gz > > >>> >>>>> mri_concat > > >>> allgrp1.rhmgxctx.fsaverage.sm05.zero.nii.gz > > >>> >>>>> > allgrp2.rhmgxctx.fsaverage.sm05.nii.gz --o > > >>> >>>>> rh.pvr_grp2_pet.nii.gz > > >>> >>>>> > > >>> >>>>> ###-----repeat steps 1-8 for > cortical > > >>> thickness------- > > >>> >>>>> > > >>> >>>>> ###run glm-fit for group1 > > >>> >>>>> mri_glmfit --y lh.pvr_grp1_pet.nii.gz > > >>> --fsgd > > >>> >>>>> project.fsgd dods --c pvr1.mtx --pvr > > >>> >>>>> lh_pvr_grp1_thickness.mgh --surf > fsaverage lh > > >>> --cortex > > >>> >>>>> --glmdir lh.grp1.pet.thickness.glmdir > > >>> >>>>> mri_glmfit --y rh.pvr_grp1_pet.nii.gz > > >>> --fsgd > > >>> >>>>> project.fsgd dods --c pvr1.mtx --pvr > > >>> >>>>> rh_pvr_grp1_thickness.mgh --surf > fsaverage lh > > >>> --cortex > > >>> >>>>> --glmdir rh.grp1.pet.thickness.glmdir > > >>> >>>>> > > >>> >>>>> ###run glm-fit for group2 > > >>> >>>>> mri_glmfit --y lh.pvr_grp2_pet.nii.gz > > >>> --fsgd > > >>> >>>>> project.fsgd dods --c pvr2.mtx --pvr > > >>> >>>>> lh_pvr_grp2_thickness.mgh --surf > fsaverage lh > > >>> --cortex > > >>> >>>>> --glmdir lh.grp2.pet.thickness.glmdir > > >>> >>>>> mri_glmfit --y rh.pvr_grp2_pet.nii.gz > > >>> --fsgd > > >>> >>>>> project.fsgd dods --c pvr2.mtx --pvr > > >>> >>>>> rh_pvr_grp2_thickness.mgh --surf > fsaverage lh > > >>> --cortex > > >>> >>>>> --glmdir rh.grp2.pet.thickness.glmdir > > >>> >>>>> > > >>> >>>>> My questions. > > >>> >>>>> 1) will my fsgd file contain > > both groups? > > >>> >>>>> 2) If the answer from > question > > is yes, > > >>> i should have 2 > > >>> >>>>> contrasts (pvr1.mtx for group1 and > > >>> pvr2.mtx for > > >>> >>>>> group2). yes/no? > > >>> >>>>> 3) below is a sample of > my fsgd > > file. > > >>> are the > > >>> >>>>> constrasts correct? > > >>> >>>>> > > >>> >>>>> Thank you very much. > > >>> >>>>> Paul. > > >>> >>>>> The fsgd file lists: > > >>> >>>>> > > >>> > ------------------------------------------------------------- > > >>> >>>>> GroupDescriptorFile 1 > > >>> >>>>> Title Relationship Amy-thick reg out > > >>> age and education > > >>> >>>>> Class g1 > > >>> >>>>> Class g2 > > >>> >>>>> Variable Age Education > > >>> >>>>> Input XX1 g1 60 16 > > >>> >>>>> Input YY1 g2 62 20 > > >>> >>>>> > > >>> > ------------------------------------------------------------- > > >>> >>>>> matrix for group1: > > >>> >>>>> pvr1.mtx= 1 0 0 0 0 0 0 > > >>> >>>>> is there a relationship > between > > >>> amyloid-thickness in group1 regressing > out age > > >>> >>>>> and education? > > >>> >>>>> matrix for group2: > > >>> >>>>> pvr2.mtx= 0 1 0 0 0 0 0 > > >>> >>>>> is there a relationship > between > > >>> amyloid-thickness in group2 regressing > out age > > >>> >>>>> and education? > > >>> >>>>> > > >>> >>>>> On Thu, Aug 1, 2019 at > 9:44 PM > > Greve, > > >>> Douglas N.,Ph.D. > > >>> >>>>> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>> > > >>> >>>>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>> > > >>> <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> > > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu> > <mailto:DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>>>>>> wrote: > > >>> >>>>> > > >>> >>>>> Each PVR adds a single column to > > >>> the design > > >>> >>>>> matrix. In a two group design, > > >>> this can make it > > >>> >>>>> tricky to set up. Let's say you > > >>> have 10 of group1 > > >>> >>>>> and 20 of group2. You will need to > > >>> create two PVR > > >>> >>>>> files, each with 30=10+20 frames. > > >>> In the first > > >>> >>>>> one, the first 10 frames will be > > >>> cortical > > >>> >>>>> thickness (or amyloid sampled on > > >>> the surface) of > > >>> >>>>> group1; the next 20 frames will be > > >>> all zeros. For > > >>> >>>>> the 2nd PVR, the first 10 frames > > >>> will be 0s and > > >>> >>>>> the next 20 frames will be the > > >>> cortical thickness > > >>> >>>>> (or amyloid) for group2. I would > > >>> start by running > > >>> >>>>> mris_preproc for the two groups > separate (so 2 > > >>> >>>>> files, one with 10 frames the > > >>> other 20 frames). > > >>> >>>>> Then create the file of zeros using > > >>> >>>>> fscalc group2.mgz mul 0 -o > > >>> group2.zeros.mgz > > >>> >>>>> Then > > >>> >>>>> mri_concat group1.mgz > group2.zeros.mgz --o > > pvr1.mgz > > >>> >>>>> Then create the contrast based on > > >>> the FSGD, but > > >>> >>>>> then add two more numbers, one for > > >>> PVR1 (which > > >>> >>>>> tests for the within group > > >>> correlation), and one > > >>> >>>>> for PVR2 > > >>> >>>>> > > >>> >>>>> > > >>> >>>>> On 8/1/2019 3:14 PM, miracle > > >>> ozzoude wrote: > > >>> >>>>>> > > >>> >>>>>> External Email - Use Caution > > >>> >>>>>> > > >>> >>>>>> Please, can anyone help me with > this. > > >>> >>>>>> Thank you > > >>> >>>>>> > > >>> >>>>>> Paul > > >>> >>>>>> > > >>> >>>>>> ---------- Forwarded message > --------- > > >>> >>>>>> From: *miracle ozzoude* > > >>> <miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com>>> <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com>>>> > > >>> >>>>>> <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com>>> > > >>> <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com> > <mailto:miracooloz@gmail.com <mailto:miracooloz@gmail.com>>>>>> > > >>> >>>>>> Date: Wed, Jul 31, 2019 at 2:11 PM > > >>> >>>>>> Subject: multimodal analysis > (pet and cortical > > >>> >>>>>> thickness relationship) using --pvr > > >>> >>>>>> To: Douglas N Greve > > >>> >>>>>> > <freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>>> > > >>> >>>>>> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> > > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu> > <mailto:freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>>>>> > > >>> >>>>>> > > >>> >>>>>> > > >>> >>>>>> Hello Experts, > > >>> >>>>>> > > >>> >>>>>> I am performing an analysis > > >>> looking at the > > >>> >>>>>> relationship between amyloid > uptake and > > cortical > > >>> >>>>>> thickness using --pvr flag in > mri_glmfit. > > I've 2 > > >>> >>>>>> groups and 2 variables (age and > education). I > > >>> >>>>>> want to run a within group > > >>> analysis while > > >>> >>>>>> regressing out age and education > (i.e. Within > > >>> >>>>>> group 1, is there a negative > > >>> relationship between > > >>> >>>>>> amyloid uptake and cortical > thickness > > regressing > > >>> >>>>>> out the effects of age and > > >>> education). > > >>> >>>>>> > > >>> >>>>>> However, i'm not sure how my pvr > contrasts > > will > > >>> >>>>>> look like. Below are my fsgd and > > >>> an attempt at > > >>> >>>>>> creating contrasts. Please, can > you let me > > know > > >>> >>>>>> if my contrasts are correct based > > >>> on my questions. > > >>> >>>>>> > > >>> >>>>>> Thank you. > > >>> >>>>>> > > >>> >>>>>> Best, > > >>> >>>>>> Paul > > >>> >>>>>> > > >>> >>>>>> The fsgd file lists: > > >>> >>>>>> > > >>> > ------------------------------------------------------------- > > >>> >>>>>> GroupDescriptorFile 1 > > >>> >>>>>> Title Relationship Amy-thick reg > > >>> out age and education > > >>> >>>>>> Class g1 > > >>> >>>>>> Class g2 > > >>> >>>>>> Variable Age Education > > >>> >>>>>> Input XX1 g1 60 16 > > >>> >>>>>> Input XX2 g1 58 14 > > >>> >>>>>> Input YY1 g2 62 20 > > >>> >>>>>> �� Input YY1 g2 62 20 > > >>> >>>>>> > > >>> > ------------------------------------------------------------- > > >>> >>>>>> matrix for group1: > > >>> >>>>>> pvrgroup1= 1 0 0 0 0 0 0 > > >>> >>>>>> is there a relationship between > > >>> amyloid-thickness in group1 regressing > out age > > >>> >>>>>> and education? > > >>> >>>>>> matrix for group2: > > >>> >>>>>> pvrgroup2= 0 1 0 0 0 0 0 > > >>> >>>>>> is there a relationship between > > >>> amyloid-thickness in group2 regressing > out age > > >>> >>>>>> and education? > > >>> >>>>>> > > >>> >>>>>> > > >>> >>>>>> > > >>> >>>>>> > > >>> >>>>>> > > _______________________________________________ > > >>> >>>>>> Freesurfer mailing list > > >>> >>>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>>>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >>>>> > > >>> >>>>> > _______________________________________________ > > >>> >>>>> Freesurfer mailing list > > >>> >>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> >>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >>>>> > > >>> >>>>> > > >>> >>>>> > _______________________________________________ > > >>> >>>>> Freesurfer mailing list > > >>> >>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >>>> > > >>> >>>> > _______________________________________________ > > >>> >>>> Freesurfer mailing list > > >>> >>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> >>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >>>> > > >>> >>>> > > >>> >>>> > _______________________________________________ > > >>> >>>> Freesurfer mailing list > > >>> >>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >>> > > >>> >>> > > >>> >>> > _______________________________________________ > > >>> >>> Freesurfer mailing list > > >>> >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >> > > >>> >> > _______________________________________________ > > >>> >> Freesurfer mailing list > > >>> >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> >> > > >>> >> > > >>> >> > _______________________________________________ > > >>> >> Freesurfer mailing list > > >>> >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> >> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> > > > >>> > > _______________________________________________ > > >>> > Freesurfer mailing list > > >>> > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > >>> > > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> > > > >>> > > > >>> > > _______________________________________________ > > >>> > Freesurfer mailing list > > >>> > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> > > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> > > >>> > > >>> _______________________________________________ > > >>> Freesurfer mailing list > > >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >>> > > >>> > > >>> _______________________________________________ > > >>> Freesurfer mailing list > > >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >> > > >> _______________________________________________ > > >> Freesurfer mailing list > > >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > >> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >> > > >> > > >> _______________________________________________ > > >> Freesurfer mailing list > > >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer