I don't think so. What is .roi format?
On 04/24/2012 12:21 PM, Gabriel Gonzalez Escamilla wrote:
Thanks Priti,
I've thought about that before, but actually I'm looking for literally .roi images, do you know if is this format possible from FS?
Regards, Gabriel
El 24/04/12, *Priti Srinivasan * rspriti@nmr.mgh.harvard.edu escribió:
Hi Gabriel,
Have you tried mri_label2vol?
If you want the volume in the anatomical space:
mri_label2vol --label labelname.label --temp <T1_template>.nii.gz --identity --o volumename.nii.gz
If you want it in some other space, you can specify the registration matrix using --reg and the template using --temp.
Hope that helps, Priti
<div style="font-family: 'Times New Roman'; font-size: 16px;
"><div>Hello
FreeSurfers,</div><div><br /></div><div>Does any one of you know if
exist
a function to export labels as a ROI format?</div><div><br /></div><div>Regards,</div><div>Gabriel</div></div><div><br />-- <br /></div><div><font size="3">--------------------------<br />PhD.
student
Gabriel González-Escamilla<br />Laboratory of Functional
Neuroscience<br
/>Department of Physiology, Anatomy, and Cell Biology<br />University Pablo de Olavide<br />Ctra. de Utrera, Km.1<br />41013 - Seville<br />- Spain -<br /><br />Email: ggonesc@upo.es<br />http://www.upo.es/neuroaging/es/</font></div> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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PhD. student Gabriel González-Escamilla Laboratory of Functional Neuroscience Department of Physiology, Anatomy, and Cell Biology University Pablo de Olavide Ctra. de Utrera, Km.1 41013 - Seville
- Spain -
Email: ggonesc@upo.es http://www.upo.es/neuroaging/es/
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