All,
I'm encountering an error when I run selxavg3-sess and I am not sure how to get around the problem, or what it means.
I am running the following command, which has worked with the data for the other participants in my study.
selxavg3-sess -s c43 -d . -analysis Flanker_nResp -overwrite
Several minutes in I am getting the following error...
GLS Beta Pass run 1 t= 0.0 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/006/flanker_nResp.par as a par3 file. run 2 t= 5.7 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/007/flanker_nResp.par as a par3 file. run 3 t=11.3 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/008/flanker_nResp.par as a par3 file. run 4 t=17.1 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/009/flanker_nResp.par as a par3 file. run 5 t=22.7 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/010/flanker_nResp.par as a par3 file. GLS Residual Pass /users/aholmes/.bashrc: line 229: SetUpFreeSurfer.sh: No such file or directory run 1 t= 0.0 Loaded /ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/006/flanker_nResp.par as a par3 file. ??? Error using ==> fclose Invalid file identifier. Use fopen to generate a valid file identifier.
Error in ==> save_nifti at 162 fclose(fp);
Error in ==> MRIwrite at 145 err = save_nifti(hdr,fspec);
Error in ==> fast_selxavg3 at 634 MRIwrite(rrunmri,fname);
ERROR: fast_selxavg3() failed\n
Does anyone know what might be going on and/or how I can correct the problem?
Thanks, Avram