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Dear Freesurfer experts,
I would really appreciate it if anyone can give me some guidance about this question that I posted a few days ago. I conducted a One-way ANOVA and now I would to report the Cohen's D effect size for each pairwise comparison (t-tests). For that purpose, I estimated the Cohen's D effect size of significant clusters using the suggested command https://secure-web.cisco.com/1X891GVe1oH7WnmTPBGAEzMHwOsWJmix391s9QJXxMfAcqdheP__HRM8V-6y8Ex3czwzr3E908fS7Hi6Ct_l2LZe2L1p8y8mZ4uVDvXEsKWHFo7SiNOAPFmJ4waZHuZCoE5cUimkRnnEHEc-Bd_uZj6YxAv1UwUF_tNXnGj3YzbePeOge7ccWlp2KlLFS0zYQRZFVrxzjd0jiYy1CIOKm4exZqpE_i1bujkCEzLsXOKy5c7ic5HlkskGnXqAV83lvx60-hNMS3ZrZsjq-eXBRQB1P-dp1KKrgIEBDGUMoItwgqz5YmOmWwE5fOWy-iI8BmK2hHfa1L01J_6bU-Z6ACw/https%3A%2F%2Fwww.mail-archive.com%2Ffreesurfer%40nmr.mgh.harvard.edu%2Fmsg52144.html:
fscalc gamma.mgh div rstd.mgh -o cohensd.mgh
Now, I get the cohensd.mgh file but I am not able to open this file. How can I see the particular effect size of each significant cluster included in the sig.cluster.summary file?.
Thank you very much in advance for your time!
Best regards,
Steve,
El mié, 15 dic 2021 a las 19:14, Steve Petersen (marfneuro@gmail.com) escribió:
Dear Freesurfer experts,
I am attempting to estimate the Cohen's D effect size of significant clusters using the suggested command https://secure-web.cisco.com/1X891GVe1oH7WnmTPBGAEzMHwOsWJmix391s9QJXxMfAcqdheP__HRM8V-6y8Ex3czwzr3E908fS7Hi6Ct_l2LZe2L1p8y8mZ4uVDvXEsKWHFo7SiNOAPFmJ4waZHuZCoE5cUimkRnnEHEc-Bd_uZj6YxAv1UwUF_tNXnGj3YzbePeOge7ccWlp2KlLFS0zYQRZFVrxzjd0jiYy1CIOKm4exZqpE_i1bujkCEzLsXOKy5c7ic5HlkskGnXqAV83lvx60-hNMS3ZrZsjq-eXBRQB1P-dp1KKrgIEBDGUMoItwgqz5YmOmWwE5fOWy-iI8BmK2hHfa1L01J_6bU-Z6ACw/https%3A%2F%2Fwww.mail-archive.com%2Ffreesurfer%40nmr.mgh.harvard.edu%2Fmsg52144.html:
fscalc gamma.mgh div rstd.mgh -o cohensd.mgh
Now, I get the cohensd.mgh file but I am not able to open this file. How can I see the particular effect size of each significant cluster included in the sig.cluster.summary file?.
Thank you very much for your help!
Best regards,