Re: [Freesurfer] vertex coordinates and thickness in mgh file

If you load it as an overlay on a surface, then freeview will give you the coordinates in fsaverage space/MNI305 space.

On 7/18/17 11:27 AM, Giuliano Giari wrote:

Dear Freesurfer users, i have to run vertex by vertex analysis of cortical thickness across subjects. As of now i have processed my data using the recon-all command and then the mris_preproc (separately for each hemisphere). I have now two .mgh file but i don’t know where to find the info that i need, namely the cortical thickness at each vertex and their coordinates. Thank you, Giuliano _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer