Hi Jackie
that's surprising. If you upload the subject we can take a look. You could also try relabeling the aseg (i.e. changing left/right labels for thalamic voxels that are incorrect)
cheers Bruce
On Thu, 3 Nov 2016, Hampton, Jackie wrote:
In some of my subjects, the medial pial line crosses over the hemispheres. It mislabels in both brainmask and aseg. So the part that it crosses too far over in the left hemisphere is now mislabeled. I have seen this issue in the forums before, but it didn’t seem that there was a definitive fix to the issue. I am just hoping someone will be able to give me some direction. I have tried deleting voxels to no avail. Thank you! I have attached screenshots of the issue that I am having.
Jackie Hampton Clinical Research Study Assistant Nico Dosenbach, MD, PhD & Deanna Greene, PhD Department of Neurology Washington University School of Medicine 660 S. Euclid Ave. | Campus Box 8111 St. Louis, MO 63110 Phone: 314-362-4154 jackiehampton@wustl.edu
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