Hi Ashley
if you upload a dataset we'll take a look. I am surprised to hear that you are having problems. Can you post an example image?
Bruce On Wed, 30 Oct 2013, Ashley Hannah wrote:
Hello, Has anyone processed a SAG FSPGR BRAVO sequence successfully through FreeSurfer?
When I run these images the program finishes without error however the output in tksurfer is grossly incorrect.
Is there a way to adjust the parameters for reading white and gray matter by freesurfer (because BRAVO has a different contrast, not as defined) so that regions and boundaries are parceled correctly?
Thanks,
Ashley