Hi Paola, I can't tell from the output what went wrong. One thing that may be going wrong is that you might not have the matlab binary in your path. From a terminal, type 'which matlab' (no quotes). Also, please don't send logs and error messages in rtf or doc formats -- it makes it harder for us to read! thanks
doug
Paola Binda wrote:
Hi all I'm having trouble with the interface between freesurfer and matlab too in my case, running mkcontrast does not open matlab and eventually generates an error
Any help to work around this problem would be very much appreciated
I'm running freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 on a Mac OS X 10.6.8 (please see details of the system/command/error message in the rtf file in attach) I've just installed Freesurfer and this is the first time I try this command
Paola
What is your platform and what version of FS are you using?
doug
On 12/15/10 2:42 PM, Katherine Sledge Moore wrote:
I am having trouble with the interface between freesurfer and
matlab. When I
run mkcontrast-sess and selxavg3-sess, matlab opens, but nothing
happens (the
script does not finish.) When I force it to quit, I get the error
"-display:
Command not found." In both mkcontrast and selxavg3-sess, the
command to call
matlab is something along the lines of "matlab -display iconic".
Any thoughts
as to why the "-display iconic" part is not being interpreted?
Katherine Sledge Moore Postdoctoral Associate Visual Cognitive Neuroscience Laboratory Yale University
http://camplab.psych.yale.edu/
http://pantheon.yale.edu/~khs8 http://pantheon.yale.edu/%7Ekhs8
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