Hi,
I am updating previously recon'd datasets done with FS versions 4.4 and 5.2 to v5.3. I'm running the recon-all command on the previously done subjects to retain any edits.
However, when I had a look at the recon-all.log, it still has a date from the previous recon in 2013.
The pctsurfcon.log contains this info (below) with an updated date, but nothing else seems to have updated... -------------- Logfile for pctsurfcon Sun Aug 14 06:12:59 IST 2016 setenv SUBJECTS_DIR /home/psych_lab/Desktop/freesurfer/FREESURFER_ DONE
cd /home/psych_lab/Desktop/freesurfer/FREESURFER_D ONE /CON9231/scripts /usr/local/freesurfer/bin/pctsurfcon $Id: pctsurfcon,v 1.11.2.1 2011/11/10 20:37:10 nicks Exp $ Linux nuig-79JP212-Ubuntu 3.13.0-43-generic #72-Ubuntu SMP Mon Dec 8 19:35:06 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /usr/local/freesurfer Cleaning up ------------- T he command I'm using
recon-all -all -s SUBJ_ID seems to works fine, even identifying initially in the terminal that the build stamps do not match. It does also take much less time than a recon from scratch.
Any thoughts would be appreciated.
Thanks for your help! Donna