Hi, I used load_nii and save_nii to read and write out the volume.
Thank you!
Francesca
2016-04-11 14:33 GMT+02:00 Francesca Strappini <francescastrappini@gmail.com
:
Hi, I used load_nii and save_nii to read and write out the volume.
Thank you! Francesca
2016-04-08 18:31 GMT+02:00 Douglas N Greve greve@nmr.mgh.harvard.edu:
can you show a pic? What were your matlab commands to read in and write out the volume?
On 04/04/2016 07:36 AM, Francesca Strappini wrote:
Dear Freesurfers,
I run the preprocessing step of some functional data with preproc-sess, then the Fourier analysis with matlab. Now, I'm trying to plot this data on the surface:
mri_vol2surf --mov Katkov_OT_45.nii.gz --trgsubject MishaK --hemi lh --reg register.dof6.dat --o Katkov_OT_45_LH.nii.gz
I used as registration matrix the one produced by the preprocessing step but when I try to visualize the map on the surface it looks like completely misaligned.
Thank you Best Francesca
-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il mailto:francesca.strappini@weizmann.ac.il
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-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il
