I don't know what you mean. did you create the cohensd.mgh file? You can get the mean value of it in each cluster with
mri_segstats --i cohensd.mgh --seg cluster.sig.ocn.mgh --exclude 0 --o sum.dat
The mean will be in the mean column
On 03/14/2018 01:46 PM, Hannah Claussenius-Kalman wrote:
We used the gamma.mgh and rstd.mgh files to derive an effect size file that we called cohensd.mgh. How can I access these files to report effect size (Cohen's /d/) for significant clusters?
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer