2 Mar
2009
2 Mar
'09
6:36 p.m.
Hello FS Team,
I had a question recently regarding an error encountered in the freesurfer recon-all. I believe error is the result of: mris_fix_topology -mgz -sphere qsphere.nofix -ga FirstOrderPoly lh
CORRECTING DEFECT 3 (vertices=10731, convex hull=2557) normal vector of length zero at vertex 90051 with 0 faces vertex 90051 has 0 face No such file or directory
recon-all exited with ERRORS
I will appreciate very much if you can suggest a possible fix or a rerun with some set of flags etc.
The partial log and a previous post by somebody else is here: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg09492.html
Thanks, Pradeep
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Pradeep Kumar Reddy. Raamana
PhD Student - Biomedical Engg.
Medical Image Analysis Lab,
Simon Fraser University,
Burnaby BC - V5A1S6 - Canada.
Work : +1 778 782 5509
"What is written without effort is, in general, read without
pleasure." - Samuel Johnson