Hi Siddharth
33364 is a pretty big defect and typically means something is pretty badly wrong with your data. This can mean that the hemis are connected, or attached to the skull or cerebellum. Take a look at the ?h.orig.nofix and see if you can figure out what is going wrong. You'll need to diagnose it before you can correct it (either by adding control points, or editing the wm.mgz typically)
cheers Bruce
On Thu, 7 Nov 2013, Ray, Siddharth wrote:
Hi Freesurfers,
Got this error while running some of my subjects:
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Correcting Topology of defect 1 with euler number -257 (129 loops)
computing statistics for defect 1: 33364 vertices
location: [ (156,125,84) - average intensity = 92.126 ]
-gray ( 86.57 , 6.29 ) -white ( 95.91 , 6.08 )
-gray ( 89.98 , 24.95 ) -white ( 98.58 , 24.03 )
-intensity (86.574921 [log = -2.404119 ]- 95.914825 [log = -2.517448 ])
-curv (k1=-0.162 (0.730) , r1 = 6.179 | k2=-0.060 (0.191), r2 = 16.806 )
-curv (k1=-0.124 (0.768) , r1 = 8.076 | k2=-0.032 (0.282), r2 = 31.306 )
MRISalloc(8654176, 520): could not allocate vertices
Cannot allocate memory
Do anyone know how to fix this?
Thanks,
-Siddharth