Hi Jonathan,
you'll need the full FreeSurfer 5.2 install in order to run the recon-all script from 5.2. Running the 5.2 recon-all script with 5.0 binaries will not work.
Best Martin
On Mon, 2013-01-07 at 13:38 -0500, Jonathan Holt wrote:
Hello all,
Having a slight issue with recon-all 5.2. For reference, we're using Freesurfer 5.0.0 and trying to use recon-all 5.2 to alleviate some issues with disappearing white matter. I'm wondering if it is necessary to have Freesurfer 5.2 in order for recon-all 5.2 to work properly?
When I say "crash" I mean it runs to completion after 30 seconds. Log files are not revelatory.
best, jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer