Hi Sam
have you tried running the post-hoc surface deformation on the 0.7mm data? Jon Polimeni (ccd) has experience with this and might be able to help you out (or Matt Glasser for that matter)
cheers Bruce
On Wed, 9 Apr 2014, Torrisi, Sam (NIH/NIMH) [F] wrote:
Good afternoon gurus-
I’m new to FS and working with 0.7mm iso 7T MPRAGEs. After bias-correction with AFNI’s 3dUnifize, recon-all ran without hitch but downsampled everything to 1mm. Now I have basically the same sentiment and question as this thread from ~2 years ago (i’m linking to the middle for simplicity):
http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg22852.html
What’s the very latest on this? Thanks!
-Salvatore (Sam) Torrisi
Section on the Neurobiology of Fear and Anxiety National Institute of Mental Health
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer