Re: [Freesurfer] Extending Pial Volume

Hi Derek,

you have to be careful about window levels and such, and make sure it's not dura.

cheers Bruce On Wed, 12 Aug 2009, Derek Huffman wrote:

Hello FreeSurfer Team,

I am wondering how to add cortex to the pial volume that is already present in the brainmask volume. When I look at the brainmask volume, there is visible cortex located outside the red "pial" line. I have already added white matter control points and corrected all white matter defects. I am wondering if you have any tips for me. I apologize if this is a repeat question but I couldn't find anything in the wiki about correcting this type of error.

Thank you, Derek