That will binarize all the labels, but you could then use that as a mask
On 07/21/2016 02:46 PM, Bruce Fischl wrote:
yes, that should work also On Thu, 21 Jul 2016, Koubiyr, Ismail wrote:
I think you can use mri_binarize and set the match values as you like. Hope it can help.
Best,
Ismail
On Jul 21, 2016, at 2:13 PM, Jinsong Tang tangjinsonghn@gmail.com wrote:
Hello freesurfers,
I want to select the subcortical structures (thalamus, pallidum, caudate, putamen, accumbens, hippocampus, and amygdala) and the 68 distinct brain regions as nodes of the individual brain networks. The labels are [9,11:13,17:18,26,48,50:54,58, 1002:1035, 2002:2035]. However, in the aparc+aseg.mgz files, there are also some other labels. Is there any way to delete all other unselected labels?
Thank you so much! Best,
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