Anastasia,
The thing not clear from me is the format for those files. I did not see an example anywhere in the wiki or in the distribution. And I am downing tutorial data now. Hope it is there. BTW, do you have an example? I know how to get those from private dicom tags.
Gen
-----Original Message----- From: Anastasia Yendiki [mailto:ayendiki@nmr.mgh.harvard.edu] Sent: Thursday, March 13, 2014 1:37 PM To: Gennan Chen Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] bvals and bvecs for dt_recon
How is the format different? Is it in 3 rows instead of 3 columns? If so, it should be straightforward to convert it yourself from 3 rows to 3 columns.
On Thu, 13 Mar 2014, Gennan Chen wrote:
Hi! All,
Is there an utility to extract bvals and bvecs from GE’s DTI dicom files into the format dt_recon can use? I try to run dt_recon as it is but it did not pick up those values. Those files are from ADNI.
Gen
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