Hi folks -
I just installed Freesurfer on my Mac (OSX 10.5.8, quad-core intel xeon). The environment variables appear to be set up properly.
source ~/.tcshrc
-------- freesurfer-Darwin-leopard-ppc-stable-pub-v4.5.0 -------- Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /Applications/freesurfer FSFAST_HOME /Applications/freesurfer/fsfast FSF_OUTPUT_FORMAT nii SUBJECTS_DIR /Applications/freesurfer/subjects MNI_DIR /Applications/freesurfer/mni FSL_DIR /CBI/bin/fsldir
However, when I try to run some of the programs, I encounter errors:
tkmedit bert orig.mgz
X Error of failed request: BadRequest (invalid request code or no such operation) Major opcode of failed request: 128 (Apple-DRI) Minor opcode of failed request: 1 () Serial number of failed request: 16 Current serial number in output stream: 16
[nothing loads]
qdec
dyld: Library not loaded: /sw/lib/libtiff.3.dylib Referenced from: /Applications/freesurfer/lib/vtk/lib/ libvtkVolumeRendering.5.0.dylib Reason: image not found Trace/BPT trap
[nothing loads]
tksurfer bert rh pial
surfer: current subjects dir: /Applications/freesurfer/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /Network/Servers/TESLA.CBI.FAS.NYU.EDU/Volumes/data1/Home/ vessel surfer: Reading header info from /Applications/freesurfer/subjects/ bert/mri/T1.mgz surfer: vertices=131860, faces=263716
WARNING: No colortable found!
surfer: single buffered window surfer: tkoInitWindow(bert)
Received X error! Error code : 1 Request code : 128 Minor code : 1
Error text : 'BadRequest (invalid request code or no such operation)'
surfer: using interface /Applications/freesurfer/lib/tcl/tksurfer.tcl [does continue to load properly]
So, it looks like perhaps I'm having some issues with X, and perhaps the tk libraries. Do you have any suggestions on what I might need to do?
X version: XQuartz 2.1.6 (xorg-server 1.4.2-apple33)
thanks, Ed
-- Ed Vessel Center for Brain Imaging New York University ed.vessel@nyu.edu 4 Washington Place, Rm. 156 New York, NY 10003 http://www.cns.nyu.edu/~vessel (212) 998-8217