Hi Linda
I'm sure Doug will reply also, but I don't think you want --reg and --regheader. I would remove the --regheader.
cheers Bruce On Fri, 10 Aug 2012, Linda Douw wrote:
Hi all,
I'm trying to project volume BOLD time series to native surface in some subjects. First, I registered the functional data to orig.mgz, using:
bbregister --s subj --mov func.nii.gz --reg register.dat --init-fsl --bold --o output.nii.gz
The results look good in tkregister2. Then, I want to go from volume to surf, doing:
mri_vol2surf --mov functional.nii.gz --reg register.dat --regheader nmr00524_FS --hemi lh --o /folder/
However, it gives this error message:
Done reading source surface Mapping Source Volume onto Source Subject Surface 1 0 0 0 using old Done mapping volume to surface Number of source voxels hit = 26361 Writing to /folder/ Dim: 132698 1 1 non-standard value for imnr1 (1, usually 256) in volume structure non-standard value for type (3, usually 0) in volume structure non-standard value for width (132698, usually 256) in volume structure non-standard value for height (1, usually 256) in volume structure
I should probably use mri_vol2vol first, but which target volume should I then use? Or is there something else I'm doing wrong?
Thanks for your help!