30 Oct
2012
30 Oct
'12
3:44 p.m.
Hello,
After successfully running a subject through freesurfer (recon-all -make all) several times as I fixed some pial and white matter edits, I now get the message that recon-all finished with errors. Inspection of the recon-all.log doesn't reveal any error messages to me in any particular step.
What should I be looking for to track down the reason that errors were generated?
I already examined the talairach transform and that looks great. I loaded the pial and white matter surfaces and they look fine. The segmentation aparc+aseg looks great too.
Thanks, Christine
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Christine N. Smith, Ph.D.
Department of Psychiatry
University of California, San Diego