Hi Bruce,
Yes, that’s perfect! Thanks for the reply!! :)
Best, Daniel
On 11/2/15, 8:48 PM, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Bruce Fischl" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of fischl@nmr.mgh.harvard.edu> wrote:
Hi Daniel
you can always convert to nifti via:
mri_convert cluster.mgh cluster.nii
and you will be able to use the FSL tools
cheers Bruce
On Tue, 3 Nov 2015, Yang, Daniel wrote:
Dear FreeSurfer experts,
I have a number of *.cluster.mgh files and I would like to calculate their difference and peak coordinate etc like in fslmaths or fslstats in FSL.
For example, given two images, I want to know the brain regions in image1 but not in image2.
Could you please recommend the general command line tools I can use for these purposes?
Many thanks, Daniel
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