Hello,
I'm trying to unpack a diffusion run and getting this error, "child process excited abnormally". Anyone encounter this before? Here are the details:
[purkinje:pat08_sess2_dti] (nmr-stable3-env) unpacksdcmdir -src /space/archive/181/siemens/TrioTim-35162-20080921-182835-474000 -targ /cluster/ablood/1/cervBTXDTI2011/data/pat08_sess2_dti -run 6 dti NII pat08_sess2_dti.nii -unpackerr
Thu Sep 29 10:56:17 EDT 2011 INFO: Logfile is /cluster/ablood/1/cervBTXDTI2011/data/pat08_sess2_dti/unpack.log Scanning source directory ... INFO: summary file is /cluster/ablood/1/cervBTXDTI2011/data/pat08_sess2_dti/dicomdir.sumfile INFO: status file is /cluster/ablood/1/cervBTXDTI2011/data/pat08_sess2_dti/parse.status 0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 34 36 38 40 42 44 46 48 50 52 54 56 58 60 62 64 66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 100 Done scanning Thu Sep 29 11:03:30 EDT 2011 ------------------------------------------ 1 localizer ok 512 512 3 1 474000-000001-000002.dcm 2 AAScout ok 128 128 128 2 474000-000002-000001.dcm 3 T1_MPRAGE_sag ok 256 256 128 1 474000-000003-000001.dcm 4 T1_MPRAGE_sag ok 256 256 128 1 474000-000004-000001.dcm 5 DIFFUSION_HighRes err 128 128 64 24 474000-000005-000001.dcm 6 DIFFUSION_HighRes err 128 128 64 70 474000-000006-000001.dcm 7 DIFFUSION_HighRes ok 128 128 64 1 474000-000007-000001.dcm 8 DIFFUSION_HighRes ok 128 128 64 1 474000-000008-000001.dcm 9 DIFFUSION_HighRes ok 128 128 64 1 474000-000009-000001.dcm 10 DIFFUSION_HighRes ok 128 128 64 1 474000-000010-000001.dcm 11 DIFFUSION_HighRes ok 128 128 64 1 474000-000011-000001.dcm 12 DIFFUSION_HighRes ok 128 128 1 64 474000-000012-000001.dcm 13 ep2d_t1w ok 64 64 30 1 474000-000013-000001.dcm 14 PASL ok 64 64 16 133 474000-000014-000001.dcm 15 PASL err 64 64 16 1 474000-000015-000001.dcm 16 PASL err 64 64 16 1 474000-000016-000001.dcm 17 PASL ok 64 64 16 133 474000-000017-000001.dcm 18 PASL err 64 64 16 1 474000-000018-000001.dcm 19 PASL err 64 64 16 1 474000-000019-000001.dcm 20 ge_functionals ok 64 64 30 126 474000-000020-000001.dcm 21 ge_functionals ok 64 64 30 174 474000-000021-000001.dcm 22 ge_functionals ok 64 64 30 174 474000-000022-000001.dcm 23 ge_functionals ok 64 64 30 128 474000-000023-000001.dcm 24 ge_functionals ok 64 64 30 126 474000-000024-000001.dcm 25 ge_functionals ok 64 64 30 174 474000-000025-000001.dcm 26 T2_TSE_Axial_HiRes ok 256 256 30 1 474000-000026-000001.dcm unpacking config ------------------ {6 dti NII pat08_sess2_dti.nii} ----------------------------------- --------------------------------------------------------- Run 6 ----------------------------------------- Thu Sep 29 11:03:30 EDT 2011 6 dti NII pat08_sess2_dti.nii INFO: this run has an error, but trying anyway ERROR: mri_convert child process exited abnormally [purkinje:pat08_sess2_dti] (nmr-stable3-env) bugr
Cut-and-paste the following info into your FreeSurfer problem report: ---------------------------------------------------------------------
FREESURFER_HOME: /usr/local/freesurfer/stable3
Build stamp: freesurfer-Linux-centos4_x86_64-stable-v3.0.5-20070714
RedHat release: CentOS release 5.5 (Final)
Kernel info: Linux 2.6.18-194.32.1.el5 x86_64
NMR Center info (/space/freesurfer exists):
machine: purkinje
SUBJECTS_DIR: /space/sake/3/users/inverse/subjects
PWD: /autofs/cluster/ablood/1/cervBTXDTI2011/data/pat08_sess2_dti
Thank you for any help!!
Sandra