did you try giving it the .img file as input and the .mgz as output?
On Tue, 2 Mar 2010, Janani Dhinakaran wrote:
Hello to everyone! Hope the new month is bringing better weather to all of you.
I am trying to load new data. I cd-d to the location of the files (.hdr and .img). Now I am trying to convert the data. It doesn't recognise the information. I've manually created the files JS, MRI, and Orig within to allocate an appropriate path for it. Here is a copy of what I did. Please let me knwo what I need to do.
Thank you!
s0964091@CRIC-0012:~/Desktop/Newdata/RAW_DATA$ cd 1_1 s0964091@CRIC-0012:~/Desktop/Newdata/RAW_DATA/1_1$ mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS mri_convert: can't determine type of output volume s0964091@CRIC-0012:~/Desktop/Newdata/RAW_DATA/1_1$ mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS/001.mgz mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS/001.mgz file not found or unknown file type for file /Desktop/Newdata/RAW_DATA/1_1 s0964091@CRIC-0012:~/Desktop/Newdata/RAW_DATA/1_1$ mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS/mri/orig/001.mgz mri_convert /Desktop/Newdata/RAW_DATA/1_1 /Desktop/Newdata/JS/mri/orig/001.mgz file not found or unknown file type for file /Desktop/Newdata/RAW_DATA/1_1