Re: [Freesurfer] labels

Hi Trisanna

yes, but Ruopeng is on vacation to it will be a while

Bruce On Mon, 25 Apr 2016, Trisanna Sprung-Much wrote:

Hi there

With regards to this email from March, I cannot seem to be able to change thresholds of .labels in Freeview. Could this be added as an option?

best wishes

Trisanna

-- Ph.D. CandidateMcGill University Integrated Program in Neuroscience Psychology

On Sun, Mar 13, 2016 at 1:45 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote: Hi Trisanna

  1. the .thresh labels have been thresholded with a p-value
  threshold that is "best" on our training set of
  manually/architectonically defined labels.

  2. Hmmm, not sure, but we have stopped development on tksurfer.
  Can you try this on freeview? I can't remember if freeview
  allows changing thresholds in labels, but if not Ruopeng can add
  it to his list of feature requests

  cheers
  Bruce



  On Sat, 12 Mar 2016, Trisanna Sprung-Much wrote:

        Hi there
        I have two questions regarding using the labels with
        tksurfer:

        1. What exactly has been done to change the .label
        (e.g. lh BA44.label) to
        .thresh.label (e.g. lh BA44.thresh.label?

        2. The instructions on this page 

        https://surfer.nmr.mgh.harvard.edu/fswiki/BrodmannAreaMaps

        to overlay the labels and set the Min and Max do not
        seem to work for me - I
        cannot seem to alter the Min from 2 and the Max from
        5. Any thoughts as to
        why?

        thanks very much!

        Trisanna


        --
        Ph.D. CandidateMcGill University
        Integrated Program in Neuroscience
        Psychology




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