21 May
2020
21 May
'20
9:35 a.m.
External Email - Use Caution
I ran freesurfer 7.1 with the following options:-
-i ./study/T1_SAG/IM-0001-0001.dcm -FLAIR ./study/SAG_3D_FLAIR/IM-0001-0001.dcm -s TEST_050620 -3T -mprage -FLAIRpial -hires -parallel -all
The job failed, the logfile recon-all_hires.log is attached. I then reran the job with the same datasets but exchanged -hires with -conf2hires and used the subject ID TEST_050620c and the job completed successfully (the logfile for this job, recon-all_conf2hires.log, is also attached). Any idea what the problem is when using the -hires option?
Thanks
Richard