Re: [Freesurfer] Question about freesurfer default settings.

FS does not warp any images. No smoothing is ever applied.

On 11/7/2022 3:30 PM, Katrina Simon wrote:

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Hi, I have a dataset i have run with the default settings of Freesurfer 6.0. A reviewer for a paper recently raised the question "Were T1 images warped with the grey matter preserved? Were volumetric images for the amygdala and hippocampus smoothed?"

I have tried to look through the archives and freesurfer papers but dont see anything that directly addresses these aspects, and some help would be appreciated.

Thank you! Katrina

-- Katrina Simon

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