Hi John
I've pushed a lot of post-contrast scans through and haven't had many issues. Have you checked the talairach? If you upload the dataset we will take a look cheers Bruce
On Wed, 1 Aug 2018, John Absher wrote:
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Has anyone else tried to do recon-all with Sagittal 3D T1 post-contrast volumes?
We’re getting hung in recon-all at the Talairach registration step, and I wonder if the vascular enhancement at the pial surface might be throwing the algorithm off. About half the scans will run smoothly, but the other half --- not so much.
Another question is whether a linear registration (e.g., using David MacDonald’s register program) would allow us to do the recon-all … -notal option?
Thanks,
John
John R. Absher, MD, FAAN
GHS Neurosciences
jabsher@ghs.org
864-350-6655 (mobile)