Hi,
Since March, recon-all exits with errors on mris_extract_main_component. This happens when analyzing the same data with the same input commands used successfully prior to March.
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From the RECON-ALL.LOG:
mris_extract_main_component ../surf/lh.orig.nofix ../surf/lh.orig.nofix
ERROR: MRISread: file '../surf/lh.orig.nofix' has more faces than vertices! Probably trying to use a scalar data file as a surface!
No such file or directory Linux node0241 2.6.9-42.0.3.ELsmp #1 SMP Fri Oct 6 06:21:39 CDT 2006 i686 i686 i386 GNU/Linux
recon-all exited with ERRORS at Tue Mar 25 12:43:45 EDT 2008
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From RECON-ALL.ERROR:
$Id: recon-all,v 1.179 2008/03/19 20:11:52 greve Exp $ /usr/local/freesurfer/dev/bin/recon-all
PWD /autofs/space/heisenberg_005/users/lbotelho/subjects/DBS_C12_15T_r2repeat/scripts CMD mris_extract_main_component ../surf/lh.orig.nofix ../surf/lh.orig.nofix
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I wonder if this may be related with the updated Freesurfer development version and about the best way to fix it.
Thank you, Luis