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Dear Douglas,
My image is in the correct orientation. The reason is that am using a software to detect brain lesions that only works in left hemisphere and my subject have the lesion in the right hemisphere. I tried it with the following command and it works
mri_convert --in_orientation PIL t1.nii t1_flip.nii
Now I would like to come back to the original orientation, which command should I use?
Thanks in advance.
Best regards,
El vie., 14 feb. 2020 a las 16:01, Douglas N. Greve (dgreve@mgh.harvard.edu) escribió:
Is the image in the wrong orientation (ie, is it not truly in PIR) or do you want to change the orientation? doing a left-right swap is more than changing the orientation
On 2/11/2020 4:06 PM, Miguel Ángel Rivas Fernández wrote:
External Email - Use CautionDear Freesurfer experts,
Which command should I use to flip the left-right orientation of a T1 image?. Actually my image is in PIR orientation, I used the following command
mri_info --orientation '/home/rmn/Desktop/study/E03/3d/coanat_E03.nii'
*PIR*
Thanks in advance,
Best regards,
-- *Miguel Ángel Rivas Fernández*
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