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To whom it may concern,
How are you recently?
I am trying to follow the the ENIGMA Cortical QC protocol to check my external surface result after order "recon-all". The detail of scripts is attached bolow (herehttp://secure-web.cisco.com/1dkHKFt2pSHfUZ0kA6gifWjCITDX34GWZl6d7V5zMMqr8bmGA960AK3qJiqrYCYdl0CLnRoAyTSstukJ_gT917gBVUFf8CWfMGHMivEKbrifU1U1RAAdh6rVHll1CaAJHMCt74FhoOWqhVLUBlzHzodcVY6vu24jsN0zC_R2Ai82ObZeg9Xlm0yjare_tm4cw134lOGn63x7wbeByn3vRBxWlSo8dkFCqSTVllM_D0SUeMgaGwPuPvrMe7YMk9x0o_hy-cx0rBn8K4ev7Rujp4Qgee1Lbk21gD26RBx1c6NPV8QPwzXHkCZzdNLhNEUcJwWJ1Rm94OFsJkIh4tZBmOj3yY1ojQ2Kz4E-TJVXEGsU/http%3A%2F%2Fenigma.ini.usc.edu%2Fwp-content%2Fuploads%2FCORTEX%2Ffsqc.sh).
I used "tksurfer" to get a series of 4 images (.tif) files for each subject. But I always met this type of error.
surfer: Error sending tcl command LblLst_UpdateInfo 33 "frontalpole" 32 1 100 0 100: invalid command name "LblLst_UpdateInfo" surfer: Error sending tcl command LabelsChanged: invalid command name "LabelsChanged"
When I tried to solve this problem, I noticed that the "freesurfer" was cannot support "tksurfer" any more. In stead, they suggested users to run another command
"tksurferfv" , which will run freeview with most of the "tksurfer" command line options. But both of tksurferfv and freeview can not support "tcl" command.
The error is written as below. Everytime I trid to run this script, I always found this error.
Option 'tcl' not recognized.
By the way, I wanna notify you that I am using freesurfer version 7.2.0 in CentOS 8.
How can I overcome this problem? Any advice would be appreciated!
Sincerely, Yuhui