Hi all, I'm running freesurfer ver 5.1 and I'm receiving an error with the command recon-all -s (subjid) -hippo-subfields. The log file terminates with the following information:
Hippocampal Subfields processing Wed Aug 15 13:59:42 EDT 2012
mkdir -p /autofs/space/shimshon_002/users/eiran/subjects/02_bay6/ tmp/subfieldResults
kvlSegmentHippocampalSubfields.sh 02_bay6 left /autofs/space/shimshon_002/users/eiran/subjects /autofs/space/shimshon_002/users/eiran/subjects/02_bay6/tmp/subfieldResults
kvlSegmentHippocampalSubfields.sh 02_bay6 right /autofs/space/shimshon_002/users/eiran/subjects /autofs/space/shimshon_002/users/eiran/subjects/02_bay6/tmp/subfieldResults
Linux shimshon 2.6.18-308.4.1.el5 #1 SMP Tue Apr 17 17:08:00 EDT 2012 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s 02_bay6 exited with ERRORS at Wed Aug 15 16:59:04 EDT 2012
Does anyone know how I can find out the specific problem causing the error? Thank you!
Einav