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that seems to work. Thank you!
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Douglas N. Greve dgreve@mgh.harvard.edu Sent: Sunday, September 12, 2021 11:23:33 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Cortical thickness difference as vertex-label overlay
Try mri_mask yourcontrast/gamma.mgh sig.masked.mgh yourcontrast/gamma.masked.mgh gamma is the contrast value (eg, patients minus controls). Is that what you wnat?
On 9/10/2021 6:20 AM, Graterol Pérez, José Alberto wrote:
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Hello,
I've done a group comparison between patients and controls, and obtained some significant cortical thickness (CT) clusters. Is there a way to obtain an overlay similar to the sig.masked, but for the vertex-wise CT values instead of the p values?
Best
José
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